CDS

Accession Number TCMCG051C04572
gbkey CDS
Protein Id XP_024455332.1
Location join(36535255..36535501,36536344..36536495,36536971..36537792,36538169..36539779)
Gene LOC7478709
GeneID 7478709
Organism Populus trichocarpa

Protein

Length 943aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024599564.1
Definition splicing factor, suppressor of white-apricot homolog isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description Splicing factor, suppressor of white-apricot homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000245        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000380        [VIEW IN EMBL-EBI]
GO:0000395        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006376        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0033119        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0045292        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048025        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050686        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCTGGAAGTGTTTGGCCGCCACGCTCTGCTTTTCGACGACGATACGATGGCGTCTTTCGTCAACTCCACCGATGCACTTGTCGAATGGAACTCTCTCTCCATCGATCGTTACGACGTCCGACATCTCCTTTCCTCTCCCCCGCCGCCTCGCTCTCGCCACCGCCACAAACATTACGACTCTCTTGAATCTGAGCTCGATCACGATCGCTACCTCGATTTAACCTATCCCTCCCTTCCACAAGACTTAGATACAGAGGCAGTTCAGGAGATTGCTGGTGTCTATAATGCGGTTTCTTTTACATATGGAAACCAACACACTGACCAAAAGAATGCTGATACCGAGTCTAGTTTTTGCCCCTCTTTCCCAGTGCCTGAACACTTGGTTCAAAACTTGCCTCCAACAGAGAAGGTGCATCAGATCATTGCAAGAACTGCCATTTTTGTTAGCAAACATGGTGGGCAATCAGAAATTGTTTTGAGGGTCAAACAGGGAGACAACCCAACTTTTGGGTTCTTGATGCCTGATCATTATCTTCATCCGTACTTTAGGTTTCTTGTTGATCATGAAGAACTTTTGAAGTCTGTCATTGATAGAAAAGCTATAGAAGAAGAAAACAGAATGGAGAATGTGCTTGACCAAACAGGTGGTCCAGCTGGAGCATTGTCATTGCTAGGTTCTATTTATGGTTCTGGAGAGAATGAAGAAGGTGCAACTGAGGATGCCCCAGCTGTTTTAGAAAAGGACCCCAAGGAAGCTGTTAATGCTGATTCTGTGATCATCTCTCCTGGATTAGAAGAAGGCGGTTCTTCTCTAAATTTAGCTGGTAAAGGCAAGGCAAGTTCCAAGCATCCAGTTACTCCTTCAAAAGAAAAGGCTCATTTGGTACGAAGAAATCGTTCCATCAGTGTAGTTCAGGCTGGAACCACAACTAGGGTGAGGAAAGAAGGTGATTCCTTGGACATGGTTTCCTCTACTGTGGATAAGTTGCAGGCTTCTGATTCATCAAGCCTGTCCAAGGTGGAAACATCTATTTTGGAGCCTCCATCTGATTTGAAGAGGGTGGTTGAGAAGATAGTTGAGTTCATTTTGAGGAACGGGAAAGAATTTGAGGCTGTTCTTGTCAAGCAGGATACTAAGCATGGAAGGTTCCCATTCCTTCTGCCATCTAACCAATATCATCCCTTCTATCTAAATGCTCTTCATAAAGCTCAGGAGTCAAGGTCATCTGGCACTGGCTTCATTTCTGAGAAGCTTGATTCCTTGGCGCATGGGATGGGCAGGAAAACAGCACTTGAAAAAAGCGATACCCTCTCATCATCTGATATACCATATGATTGCAATAGGAAAGAGAAGTTTAAAATGGTCATTGGAAAGTCAAAGAAGGATGGACAAGACCCACCTTCAAAAGCCACCCCACCTCAAGTAGGTGTCAGTGTGGATGCAGCTGCAGCTATTCTTCAGGCTGCCACTAAAGGTGTCAAGAATCCCCGTTTAGAAATACTATCAAAGACATCAATAAATGGCATCATTCAAGGTCCTAACACTGAAAGTGGGACACCCAGTGGCCCTAGCAGCTTGCTTTCCCAGGCTCAAAGTTCCAGCAAAAAGCTTGATCATGGTGAACCTGGGGCTTTTATTCCTGTGGTGAGGGCTATTGCGCAGACAGCTGCTATTGCAGCAGCAAGTGAGGCTGATTCTTCTGAAGCCAGCTTGACAAGAGAGCAGAAGTTGAAGGCTGAGAGACTGAAACGGGCAAAGATGTTTGCAAGTATGATAAAAAATGGAGGAGCTGCACCATTAAGGAATGAATCATCGCGTGGGTTATCTGCAGAACCACCTGAATCTGGGCTCTCTGCTTCAGGCACTCAAATTGTAAACCTCACAGGCTTTGAAAGGGAAGGCAGCTTATGTCAGTTAGATGTTAATACTTCTGATAAAGTTGAGAAGAAAGAATCAGCTGGTGGCCATAACGAGCGACGATCGAAGAGAAAGTACCGCTCAAGATCTAAAAGAGAAGAAGGAGAAGGGGAAGAAGGGGAATTGGAAGAAATCCGGGATCAGAAACTTGTCAGGAAGAAACAATCTCGTTATAGCTCACATCAGAGTAGCAATAGACGCAAACAAAAAAGAGAGAATACTTTGTCCAAGGAAAAAGATTATCAGCATGGGCACAACCACAATCATACTTCAGATGATGAGCATGATCATGCTCAAGGTATCTATACTGATGGCGAGCATAAACAGAAGCATTACAGTTCCTCTGATTACGAGAGTAGTCGCCATCAACATGGGTGTAAGCGTAGTTCTCTTGAATCTCATCTTAGGCACTCTCAACACAGGCATAAGCATGATTATTCCTCTGATGATGAGCATAGGCATTCTCGGCATGGGCATGAACATGATACCTCTTCTGATCACAAGCGCAAGCACTCTCGTCACAAGCGCAAGCACAGTAGTTTCTTAGATGATGAACATAAGCACTCTCGACATAGAAGCAAGGGCGGCAACTCTTCTAACGAACATTTTCAGTATGAGCATAAGCATTGTAGCTCCTCAGATGACGAGGATCTGCATCACAGAAAATCTGTTAAGCATGTGAAGAAATCTCTCTTGGAAAGAGAAGCTGACTTGGAAGAAGGGGAGATCCTTACAAAATCAGATCAATCAAAAGCAAGTGGGGGTGGAGATGGTGTTAGTAGGGAAGCTTCTGTGGATTTATCAAAATCATACAACGATGTAAGGTCCTCTTCTCGGCCATCTGAAACTACTGAGGTTTCTGATGACCTTAGGGCCAAAATACGGGCCATGTTGATGGCAACCTTGTAA
Protein:  
MDLEVFGRHALLFDDDTMASFVNSTDALVEWNSLSIDRYDVRHLLSSPPPPRSRHRHKHYDSLESELDHDRYLDLTYPSLPQDLDTEAVQEIAGVYNAVSFTYGNQHTDQKNADTESSFCPSFPVPEHLVQNLPPTEKVHQIIARTAIFVSKHGGQSEIVLRVKQGDNPTFGFLMPDHYLHPYFRFLVDHEELLKSVIDRKAIEEENRMENVLDQTGGPAGALSLLGSIYGSGENEEGATEDAPAVLEKDPKEAVNADSVIISPGLEEGGSSLNLAGKGKASSKHPVTPSKEKAHLVRRNRSISVVQAGTTTRVRKEGDSLDMVSSTVDKLQASDSSSLSKVETSILEPPSDLKRVVEKIVEFILRNGKEFEAVLVKQDTKHGRFPFLLPSNQYHPFYLNALHKAQESRSSGTGFISEKLDSLAHGMGRKTALEKSDTLSSSDIPYDCNRKEKFKMVIGKSKKDGQDPPSKATPPQVGVSVDAAAAILQAATKGVKNPRLEILSKTSINGIIQGPNTESGTPSGPSSLLSQAQSSSKKLDHGEPGAFIPVVRAIAQTAAIAAASEADSSEASLTREQKLKAERLKRAKMFASMIKNGGAAPLRNESSRGLSAEPPESGLSASGTQIVNLTGFEREGSLCQLDVNTSDKVEKKESAGGHNERRSKRKYRSRSKREEGEGEEGELEEIRDQKLVRKKQSRYSSHQSSNRRKQKRENTLSKEKDYQHGHNHNHTSDDEHDHAQGIYTDGEHKQKHYSSSDYESSRHQHGCKRSSLESHLRHSQHRHKHDYSSDDEHRHSRHGHEHDTSSDHKRKHSRHKRKHSSFLDDEHKHSRHRSKGGNSSNEHFQYEHKHCSSSDDEDLHHRKSVKHVKKSLLEREADLEEGEILTKSDQSKASGGGDGVSREASVDLSKSYNDVRSSSRPSETTEVSDDLRAKIRAMLMATL